Overview
Celemics’ CancerScreen Service is designed to detect all types
of variants including gene rearrangement in various somatic
cancer-related genes.
genes (Core, 50, 100, and 400). Customers can choose a target enrichment
panel which suits their purpose. Also, if the gene of interest does not exist in the panel, it can be added
separately through our gene add-on service.
Features &
Benefits
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- Optimized panel for solid cancer
- Assess DNA, RNA, and the whole CDS regions (RefSeq) of up to 407 genes
and rearrangement regions associated with solid cancer
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- High sensitivity and specificity
- Detect low-frequency and rare variants with high sequencing depths
- Capture the GC rich and homologous regions with Celemics
Proprietary probe design technology
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- Cost-effective sequencing
- Lower sequencing costs compared to competitor product due to
Celemics’ superior uniformity of coverage - Provide flexible panels with a gene add-on service
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- Assess all variant types
- Detect all mutation types including SNV, Indel, Large Indel, CNV,
Rearrangement, MSI, and TMB in a single assay
Performance
Performance Comparison with Competitor Product Comparison data with competitors' products
Higher on-target ratio, uniformity, coverage at 100X compared to competitor product over the target regions including exons and introns
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Performance Comparison over GC-rich Regions
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Higher uniform read depths over GC-rich regions compared to competitor product
Flexible
panel options
CancerScreen Panel - Core
| ALK | APC | BRAF | EGFR | ERBB2 | KRAS | MET | NRAS | PIK3CA | RET | ROS1 | SMAD4 | TP53 |
Genes in bold indicate fusion analysis
CancerScreen Panel - 50
| ABL1 | AKT1 | ALK | APC | ATM | BRAF | BRCA1 | BRCA2 | CDH1 | CDK4 | CDK6 | CDKN2A |
| CSF1R | CTNNB1 | DDR2 | EGFR | ERBB2 | ERBB4 | ESR1 | FGFR1 | FGFR2 | FGFR3 | GNA11 | GNAQ |
| GNAS | HRAS | IDH1 | IDH2 | JAK2 | KDR | KIT | KRAS | MAP2K1 | MET | MLH1 | MTOR |
| MYC | MYCN | NOTCH1 | NRAS | NTRK1 | PDGFRA | PIK3CA | PTCH1 | PTEN | PTPN11 | RB1 | RET |
| ROS1 | SMAD4 | SMO | SRC | STK11 | TP53 |
Genes in bold indicate fusion analysis
CancerScreen Panel - 100
| ABL1 | AKT1 | AKT2 | AKT3 | ALK | APC | ARID1A | ARID1B | ARID2 | ATM | ATRX | AURKA |
| AURKB | BARD1 | BCL2 | BLM | BMPR1A | BRAF | BRCA1 | BRCA2 | BRIP1 | CDH1 | CDK4 | CDK6 |
| CDKN2A | CHEK2 | CSF1R | CTNNB1 | DDR2 | EGFR | EPCAM | EPHB4 | ERBB2 | ERBB3 | ERBB4 | EZH2 |
| FBXW7 | FGFR1 | FGFR2 | FGFR3 | FLT3 | GNA11 | GNAQ | GNAS | HNF1A | HRAS | IDH1 | IDH2 |
| IGF1R | ITK | JAK1 | JAK2 | JAK3 | KDR | KIT | KRAS | MDM2 | MET | MLH1 | MPL |
| MRE11 | MSH2 | MSH6 | MTOR | MUTYH | NBN | NF1 | NOTCH1 | NPM1 | NRAS | NTRK1 | PALB2 |
| PDGFRA | PDGFRB | PIK3CA | PIK3R1 | PMS2 | PRSS1 | PTCH1 | PTCH2 | PTEN | PTPN11 | RAD50 | RAD51C |
| RAD51D | RB1 | RET | ROS1 | SLX4 | SMAD4 | SMARCB1 | SMO | SRC | STK11 | SYK | TERT |
| TOP1 | TP53 | VHL |
CancerScreen Panel - 400
| ABL1 | ABL2 | ADGRA2 | AKT1 | AKT2 | AKT3 | ALK | AMER1 | APC | APCDD1 | APEX1 | APOB |
| APOBEC1 | AR | ARAF | ARFRP1 | ARID1A | ARID1B | ARID2 | ASXL1 | ATM | ATP11B | ATR | ATRX |
| AURKA | AURKB | AXIN1 | AXL | B2M | B3GAT1 | BACH1 | BAP1 | BARD1 | BCL2 | BCL6 | BCL9 |
| BCOR | BCR | BIRC2 | BIRC3 | BLM | BRAF | BRCA1 | BRCA2 | BRD2 | BRD3 | BRD4 | BRIP1 |
| BTG1 | BTK | BTLA | CARD11 | CASP5 | CASP8 | CBFB | CBL | CDK12 | CDK4 | CDK6 | CDK8 |
| CDKN1A | CDKN1B | CDKN2A | CDKN2B | CDKN2C | CDX2 | CEBPA | CHD1 | CHD2 | CHD4 | CHEK1 | CHEK2 |
| CHUK | CIC | CRBN | CREBBP | CRKL | CRLF2 | CSF1R | CSF2 | CSF2RA | CSF2RB | CSNK2A1 | CTCF |
| CTLA4 | CTNNA1 | CTNNB1 | CUL3 | CUL4A | CUL4B | CXCL10 | CXCL11 | CXCL9 | CXCR3 | CYLD | CYP17A1 |
| DAXX | DCUN1D1 | DDR2 | DICER1 | DIS3 | DNMT1 | DNMT3A | DOCK2 | DOT1L | EGFR | ELMO1 | EML4 |
| EMSY | EP300 | EPHA3 | EPHA5 | EPHA6 | EPHA7 | EPHB1 | EPHB4 | EPHB6 | ERBB2 | ERBB3 | ERBB4 |
| ERCC1 | ERCC2 | ERG | ERRFI1 | ESR1 | ETV1 | ETV4 | ETV5 | ETV6 | EWSR1 | EYA2 | EZH2 |
| FANCA | FANCC | FANCD2 | FANCE | FANCF | FANCG | FANCI | FANCL | FANCM | FAS | FAT1 | FAT3 |
| FBXW7 | FGF1 | FGF10 | FGF12 | FGF14 | FGF19 | FGF2 | FGF23 | FGF3 | FGF4 | FGF6 | FGF7 |
| FGFR1 | FGFR2 | FGFR3 | FGFR4 | FH | FLCN | FLT1 | FLT3 | FLT4 | FOXA1 | FOXL2 | FOXO3 |
| FOXP3 | FRS2 | FUBP1 | GABRA6 | GAS6 | GATA1 | GATA2 | GATA3 | GATA4 | GATA6 | GID4 | GLI1 |
| GNA11 | GNA13 | GNAQ | GNAS | GRIN2A | GRM3 | GSK3B | GUCY1A2 | GZMA | GZMB | GZMH | H3F3A |
| HGF | HIST1H3B | HNF1A | HOXA3 | HRAS | HSD3B1 | HSP90AA1 | IDH1 | IDH2 | IDO1 | IDO2 | IFITM1 |
| IFITM3 | IFNA1 | IFNB1 | IFNG | IGF1 | IGF1R | IGF2 | IGF2R | IKBKE | IKZF1 | IL12A | IL12B |
| IL2 | IL23A | IL6 | IL7R | INHBA | INPP4B | INSR | IRF2 | IRF4 | IRS2 | ITGAE | ITK |
| JAK1 | JAK2 | JAK3 | JUN | KAT6A | KDM5A | KDM5C | KDM6A | KDR | KEAP1 | KEL | KIT |
| KLF4 | KLHL6 | KMT2A | KMT2B | KMT2C | KNSTRN | KRAS | LAG3 | LMO1 | LRP1B | LRP6 | LTK |
| LYN | LZTR1 | MAGI2 | MAGOH | MAML1 | MAP2K1 | MAP2K2 | MAP2K4 | MAP3K1 | MAP3K13 | MAPK1 | MAX |
| MCL1 | MDM2 | MDM4 | MED12 | MEF2B | MEN1 | MET | MITF | MLH1 | MPL | MRE11 | MSH2 |
| MSH6 | MTOR | MUTYH | MYB | MYC | MYCL | MYCN | MYD88 | MYO18A | NCOA3 | NCOR1 | NF1 |
| NF2 | NFE2L2 | NFKBIA | NOTCH1 | NOTCH2 | NOTCH3 | NOTCH4 | NPM1 | NRAS | NSD1 | NSD3 | NTRK1 |
| NTRK2 | NTRK3 | NUP93 | NUTM1 | PAK3 | PAK5 | PALB2 | PARP1 | PARP2 | PARP3 | PARP4 | PAX5 |
| PBRM1 | PDCD1 | PDCD1LG2 | PDGFRA | PDGFRB | PDK1 | PGR | PHF6 | PHLPP2 | PIK3C2B | PIK3C3 | PIK3CA |
| PIK3CB | PIK3CG | PIK3R2 | PKHD1 | PLCG1 | PLCG2 | PMS2 | PNP | PNRC1 | POLD1 | POLE | PPARG |
| PPP2R1A | PRDM1 | PREX2 | PRF1 | PRKAR1A | PRKCI | PRKDC | PRPF40B | PRSS8 | PTCH1 | PTCH2 | PTEN |
| PTK2 | PTPN11 | PTPRC | PTPRD | QKI | RAB35 | RAC1 | RAC2 | RAD17 | RAD50 | RAD51 | RAD52 |
| RAD54L | RAF1 | RANBP2 | RARA | RB1 | RBM10 | REL | RET | RHEB | RHOA | RHOB | RICTOR |
| ROBO1 | ROBO2 | ROS1 | RPA1 | RPS6KB1 | RPTOR | RUNX1 | RUNX1T1 | RUNX3 | SDHA | SDHB | SDHC |
| SDHD | SEMA3A | SEMA3E | SET | SETBP1 | SETD2 | SF3A1 | SF3B1 | SH2B3 | SKP2 | SLIT2 | SMAD2 |
| SMAD3 | SMAD4 | SRSF2 | SRSF7 | STAG2 | STAT3 | STAT4 | TERT | TET2 |
Applications
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Somatic cancer related fields